Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890941.1_cds_XP_016445647.1_40590
CDS Infomation

[gene=LOC107770829] [db_xref=GeneID:107770829] [protein=casein kinase I-like isoform X1] [protein_id=XP_016445647.1] [location=complement(join(9944..10225,10393..10529,11625..11688,11789..11862,11994..12120,12291..12375,12479..12542,12629..12690,13236..13306,13729..13803,14276..14371,14450..14598,14695..14764,15366..15406,15508..15583))] [gbkey=CDS]
Sequence

ATGGATCATGTGGTGGGTGGCAAGTTTAAGCTAGGCCGAAAGATCGGTAGTGGATCTTTT
GGGGAACTTTATTTAGGGGTCAATGTACAAACTGGAGAAGAAGTTGCTGTGAAGCTGGAA
TCAACTAAAACAAAGCACCCTCAACTTCATTATGAATCAAAGCTGTATATGCTTCTACAA
GGAGGAACTGGAATTCCACACCTCAAGTGGTTTGGCGTTGAAGGTGAATACAATGCCATG
GTTATTGACCTTCTTGGGCCAAGTTTGGAAGACTTGTTTAACTATTGCAATAGGAGGTTC
ACTTTAAAGACAGTGTTAATGCTGGCAGATCAGTTGATTAATAGGGTTGAATATATGCAC
TCGAGAGGATTTCTTCACCGTGACATTAAGCCCGACAACTTCTTAATGGGTTTAGGGCGT
AAAGCAAATCAGGGTCTAGCCAACTGGCCAGGAATGCATTTGGTTCAATTTCTAGGAGAA
ATGCTCAAAATCCAGTTTGTTTTCCAGGTATACATCATTGACTACGGTCTTGCCAAGAAG
TACAGAGATCTTCAGACGCATAAGCATATACCATACAGGGAAAACAAAAACCTCACGGGA
ACTGCTCGTTATGCTAGCGTTAACACCCATCTTGGAGTTGAACAAAGCAGAAGAGACGAT
CTGGAGTCTCTCGGTTATGTGCTTATGTATTTCTTGAGAGGAAGTCTGCCGTGGCAAGGT
TTGAAAGCTGGCACCAAAAAGCAGAAATATGATAAGATTAGTGAGAAGAAGATGCTTACA
CCTATAGAGGTGCTTTGCAAATCCTATCCCTCAGAATTCATATCATATTTCCATTACTGC
CGATCACTACGGTTTGATGACAAGCCAGATTACTCATACCTGAAGAGGCTATTCCGAGAC
CTTTTTATTAGAGAAGGTTATCAATTTGACTATGTATTTGACTGGACTATCTTGAAGTAT
CCACAGATTGGCTCTAGTTCAAGAGGACGACAACCTACTGGGAGATTACCTGTGAACCCA
GGACCATCTGCTGAAAGAGCAGAAAAGATTCCTGTGAGGCAGGAAATTAAAGATAGGTTT
TCTGGTGCTGTTGAGGCGTTTACTAGAAGGAACGTATCTGGAACTGGTTTGCAAGGGGAC
CATTTGAGACACCACAGATCTTCAGAAGATGTACCATCATCCAAGGATGTGCAAGCTGAT
ACTGAAAGAGGCCGTGTAACTCGGACCGGTAGCACCTCGAGGAGGGCGGCTGTAATGGGA
AGCAGCCGACCAAGCTCATCTGGTGAACCCACTGACAATCGCACTGGTCGTTTGGGTTCA
AGTAGTGGCCGTATTTCCACTACCCAAAGAGTACAACCTGGATTTGAGTCCAAGTCATCA
TCTTTTACCCGCGCTACTGCAACAAGAGGCGGTAGGGATGATGCTCTTAGGAGCTTTGAG
CTGCTAACTATTGGCACTGGAAGAAGGAAATGA

Peptide Sequence

PEP ID

XP_016445647.1
PEP Infomation

PREDICTED: casein kinase I-like isoform X1 [Nicotiana tabacum]
Sequence

MDHVVGGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLESTKTKHPQLHYESKLYMLLQ
GGTGIPHLKWFGVEGEYNAMVIDLLGPSLEDLFNYCNRRFTLKTVLMLADQLINRVEYMH
SRGFLHRDIKPDNFLMGLGRKANQGLANWPGMHLVQFLGEMLKIQFVFQVYIIDYGLAKK
YRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQG
LKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFISYFHYCRSLRFDDKPDYSYLKRLFRD
LFIREGYQFDYVFDWTILKYPQIGSSSRGRQPTGRLPVNPGPSAERAEKIPVRQEIKDRF
SGAVEAFTRRNVSGTGLQGDHLRHHRSSEDVPSSKDVQADTERGRVTRTGSTSRRAAVMG
SSRPSSSGEPTDNRTGRLGSSSGRISTTQRVQPGFESKSSSFTRATATRGGRDDALRSFE
LLTIGTGRRK

Transcript Sequence

Gene sequence data has not been registered.